WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58B3.8.1 Sequence Name  F58B3.8.1
Length (nt)  1119   Chromosome Location  IV: 11619363-11621009
Chromosome . Primary Identifier  IV Chromosome Location . Start  11619363
Chromosome Location . End  11621009 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58B3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001107 dsl-5 F58B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58B3.8 F58B3.8 909   IV: 11619502-11619863

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58B3.8.1 11619363 11621009 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144941   501   IV: 11619363-11619863 Caenorhabditis elegans
Exon144942   128   IV: 11619916-11620043 Caenorhabditis elegans
Exon144943   368   IV: 11620474-11620841 Caenorhabditis elegans
Exon144944   122   IV: 11620888-11621009 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58B3.8.1 11619363 11621009 -1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript