WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58B3.5a.1 Sequence Name  F58B3.5a.1
Length (nt)  2995   Chromosome Location  IV: 11631941-11635487
Chromosome . Primary Identifier  IV Chromosome Location . Start  11631941
Chromosome Location . End  11635487 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58B3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003415 mars-1 F58B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58B3.5a F58B3.5a 2754   IV: 11632167-11632298

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58B3.5a.1 11631941 11635487 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144964   358   IV: 11631941-11632298 Caenorhabditis elegans
Exon144966   659   IV: 11632372-11633030 Caenorhabditis elegans
Exon144969   105   IV: 11633082-11633186 Caenorhabditis elegans
Exon144971   1454   IV: 11633517-11634970 Caenorhabditis elegans
Exon144972   324   IV: 11635017-11635340 Caenorhabditis elegans
Exon144973   95   IV: 11635393-11635487 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58B3.5a.1 11631941 11635487 -1

1 Sequence

Length
2995

1 Sequence Ontology Term

Identifier Name Description
transcript