WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK792.1a.1 Sequence Name  ZK792.1a.1
Length (nt)  1627   Chromosome Location  IV: 11659844-11665200
Chromosome . Primary Identifier  IV Chromosome Location . Start  11659844
Chromosome Location . End  11665200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK792.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014076 ZK792.1 ZK792.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK792.1a ZK792.1a 1428   IV: 11659913-11659924

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.1a.1 11659844 11665200 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145034   81   IV: 11659844-11659924 Caenorhabditis elegans
Exon145035   39   IV: 11662193-11662231 Caenorhabditis elegans
Exon145037   58   IV: 11662362-11662419 Caenorhabditis elegans
Exon145039   128   IV: 11662464-11662591 Caenorhabditis elegans
Exon145041   65   IV: 11662859-11662923 Caenorhabditis elegans
Exon145043   162   IV: 11662969-11663130 Caenorhabditis elegans
Exon145045   107   IV: 11663719-11663825 Caenorhabditis elegans
Exon145047   560   IV: 11663873-11664432 Caenorhabditis elegans
Exon145049   183   IV: 11664695-11664877 Caenorhabditis elegans
Exon145052   244   IV: 11664957-11665200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.1a.1 11659844 11665200 1

1 Sequence

Length
1627

1 Sequence Ontology Term

Identifier Name Description
transcript