WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK792.8.1 Sequence Name  ZK792.8.1
Length (nt)  1696   Chromosome Location  IV: 11668024-11671505
Chromosome . Primary Identifier  IV Chromosome Location . Start  11668024
Chromosome Location . End  11671505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK792.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014080 atg-4.2 ZK792.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK792.8 ZK792.8 1566   IV: 11668050-11668303

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.8.1 11668024 11671505 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145073   280   IV: 11668024-11668303 Caenorhabditis elegans
Exon145074   140   IV: 11668891-11669030 Caenorhabditis elegans
Exon145075   87   IV: 11669075-11669161 Caenorhabditis elegans
Exon145076   101   IV: 11669519-11669619 Caenorhabditis elegans
Exon145077   311   IV: 11669667-11669977 Caenorhabditis elegans
Exon145078   166   IV: 11670220-11670385 Caenorhabditis elegans
Exon145079   105   IV: 11670433-11670537 Caenorhabditis elegans
Exon145080   90   IV: 11670585-11670674 Caenorhabditis elegans
Exon145081   144   IV: 11670804-11670947 Caenorhabditis elegans
Exon145082   272   IV: 11671234-11671505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.8.1 11668024 11671505 1

1 Sequence

Length
1696

1 Sequence Ontology Term

Identifier Name Description
transcript