WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK792.6.1 Sequence Name  ZK792.6.1
Length (nt)  1385   Chromosome Location  IV: 11688227-11691088
Chromosome . Primary Identifier  IV Chromosome Location . Start  11688227
Chromosome Location . End  11691088 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK792.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002335 let-60 ZK792.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK792.6 ZK792.6 555   IV: 11689046-11689105

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.6.1 11688227 11691088 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145106   879   IV: 11688227-11689105 Caenorhabditis elegans
Exon145107   171   IV: 11689831-11690001 Caenorhabditis elegans
Exon145108   195   IV: 11690059-11690253 Caenorhabditis elegans
Exon145109   140   IV: 11690949-11691088 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK792.6.1 11688227 11691088 -1

1 Sequence

Length
1385

1 Sequence Ontology Term

Identifier Name Description
transcript