WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22B3.2b.2 Sequence Name  T22B3.2b.2
Length (nt)  3225   Chromosome Location  IV: 11704338-11708259
Chromosome . Primary Identifier  IV Chromosome Location . Start  11704338
Chromosome Location . End  11708259 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22B3.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011910 alg-3 T22B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22B3.2b T22B3.2b 3108   IV: 11704365-11704419

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22B3.2b.2 11704338 11708259 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145184   82   IV: 11704338-11704419 Caenorhabditis elegans
Exon145188   167   IV: 11704694-11704860 Caenorhabditis elegans
Exon145192   173   IV: 11704910-11705082 Caenorhabditis elegans
Exon145195   885   IV: 11705128-11706012 Caenorhabditis elegans
Exon145198   217   IV: 11706065-11706281 Caenorhabditis elegans
Exon145201   508   IV: 11706328-11706835 Caenorhabditis elegans
Exon145204   263   IV: 11706886-11707148 Caenorhabditis elegans
Exon145207   125   IV: 11707193-11707317 Caenorhabditis elegans
Exon145210   498   IV: 11707362-11707859 Caenorhabditis elegans
Exon145213   125   IV: 11707906-11708030 Caenorhabditis elegans
Exon145215   182   IV: 11708078-11708259 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22B3.2b.2 11704338 11708259 1

1 Sequence

Length
3225

1 Sequence Ontology Term

Identifier Name Description
transcript