WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A6.6a.1 Sequence Name  K01A6.6a.1
Length (nt)  1570   Chromosome Location  IV: 11735325-11742305
Chromosome . Primary Identifier  IV Chromosome Location . Start  11735325
Chromosome Location . End  11742305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A6.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010448 K01A6.6 K01A6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A6.6a K01A6.6a 1356   IV: 11735379-11735471

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A6.6a.1 11735325 11742305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145233   147   IV: 11735325-11735471 Caenorhabditis elegans
Exon145235   60   IV: 11735520-11735579 Caenorhabditis elegans
Exon145237   168   IV: 11735927-11736094 Caenorhabditis elegans
Exon145239   110   IV: 11736160-11736269 Caenorhabditis elegans
Exon145241   114   IV: 11736315-11736428 Caenorhabditis elegans
Exon145243   149   IV: 11736488-11736636 Caenorhabditis elegans
Exon145245   86   IV: 11736747-11736832 Caenorhabditis elegans
Exon145253   119   IV: 11740487-11740605 Caenorhabditis elegans
Exon145255   143   IV: 11740826-11740968 Caenorhabditis elegans
Exon145257   107   IV: 11741483-11741589 Caenorhabditis elegans
Exon145259   107   IV: 11741633-11741739 Caenorhabditis elegans
Exon145261   260   IV: 11742046-11742305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A6.6a.1 11735325 11742305 1

1 Sequence

Length
1570

1 Sequence Ontology Term

Identifier Name Description
transcript