WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12A7.1 Sequence Name  T12A7.1
Length (nt)  1878   Chromosome Location  IV: 11745676-11745749
Chromosome . Primary Identifier  IV Chromosome Location . Start  11745676
Chromosome Location . End  11745749
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A7.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27445 GEM-4 70.2 625 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053165
WBRNAi00083928
WBRNAi00083927

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12A7.1 11745676 11745749 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12A7.1 11745676 11745749 1
CDS:T12A7.1 11746023 11746259 1
CDS:T12A7.1 11746316 11746468 1
CDS:T12A7.1 11746779 11747090 1
CDS:T12A7.1 11747138 11747219 1
CDS:T12A7.1 11747265 11747780 1
CDS:T12A7.1 11747828 11747893 1
CDS:T12A7.1 11748151 11748588 1

1 Sequence

Length
1878

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12A7.1.1 T12A7.1.1 2015   IV: 11745640-11748689
Transcript:T12A7.1.2 T12A7.1.2 1945   IV: 11745640-11748640