WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A7.3.1 Sequence Name  T12A7.3.1
Length (nt)  815   Chromosome Location  IV: 11752905-11754428
Chromosome . Primary Identifier  IV Chromosome Location . Start  11752905
Chromosome Location . End  11754428 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011724 scl-18 T12A7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A7.3 T12A7.3 678   IV: 11752987-11753083

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A7.3.1 11752905 11754428 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145306   179   IV: 11752905-11753083 Caenorhabditis elegans
Exon145307   116   IV: 11753361-11753476 Caenorhabditis elegans
Exon145308   319   IV: 11753529-11753847 Caenorhabditis elegans
Exon145309   201   IV: 11754228-11754428 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A7.3.1 11752905 11754428 -1

1 Sequence

Length
815

1 Sequence Ontology Term

Identifier Name Description
transcript