WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A6.5a.2 Sequence Name  K01A6.5a.2
Length (nt)  664   Chromosome Location  IV: 11742706-11743789
Chromosome . Primary Identifier  IV Chromosome Location . Start  11742706
Chromosome Location . End  11743789 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A6.5a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010447 K01A6.5 K01A6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A6.5a K01A6.5a 624   IV: 11742706-11742748

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A6.5a.2 11742706 11743789 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145320   43   IV: 11742706-11742748 Caenorhabditis elegans
Exon145322   109   IV: 11742897-11743005 Caenorhabditis elegans
Exon145325   439   IV: 11743170-11743608 Caenorhabditis elegans
Exon145328   41   IV: 11743672-11743712 Caenorhabditis elegans
Exon145330   32   IV: 11743758-11743789 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A6.5a.2 11742706 11743789 1

1 Sequence

Length
664

1 Sequence Ontology Term

Identifier Name Description
transcript