WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12A7.4a Sequence Name  T12A7.4a
Length (nt)  990   Chromosome Location  IV: 11768874-11768960
Chromosome . Primary Identifier  IV Chromosome Location . Start  11768874
Chromosome Location . End  11768960
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A7.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40470 LIPS-5, isoform a 36.1 329 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053168
WBRNAi00035496

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12A7.4a 11768874 11768960 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011725 lips-5 T12A7.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12A7.4a 11768874 11768960 -1
CDS:T12A7.4a 11769578 11769654 -1
CDS:T12A7.4a 11770030 11770198 -1
CDS:T12A7.4a 11770792 11770922 -1
CDS:T12A7.4a 11770967 11771121 -1
CDS:T12A7.4a 11771315 11771397 -1
CDS:T12A7.4a 11772125 11772223 -1
CDS:T12A7.4a 11773448 11773636 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12A7.4a.1 T12A7.4a.1 1243   IV: 11768621-11773636