WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12A7.5 Sequence Name  T12A7.5
Length (nt)  3231   Chromosome Location  IV: 11779295-11779408
Chromosome . Primary Identifier  IV Chromosome Location . Start  11779295
Chromosome Location . End  11779408
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A7.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13581 LPR-2 123.1 1076 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001777
WBRNAi00053169
WBRNAi00018623

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12A7.5 11779295 11779408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011726 lpr-2 T12A7.5 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12A7.5 11779295 11779408 1
CDS:T12A7.5 11779451 11779590 1
CDS:T12A7.5 11779835 11779935 1
CDS:T12A7.5 11779988 11780080 1
CDS:T12A7.5 11780125 11780268 1
CDS:T12A7.5 11780311 11780447 1
CDS:T12A7.5 11780499 11780617 1
CDS:T12A7.5 11780663 11780769 1
CDS:T12A7.5 11780981 11781187 1
CDS:T12A7.5 11781238 11781573 1
CDS:T12A7.5 11781654 11781860 1
CDS:T12A7.5 11781912 11782063 1
CDS:T12A7.5 11782517 11782644 1
CDS:T12A7.5 11782691 11782818 1
CDS:T12A7.5 11782901 11782976 1
CDS:T12A7.5 11783805 11783935 1
CDS:T12A7.5 11784164 11784270 1
CDS:T12A7.5 11784990 11785096 1
CDS:T12A7.5 11786118 11786382 1
CDS:T12A7.5 11786427 11786858 1

1 Sequence

Length
3231

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12A7.5.1 T12A7.5.1 3427   IV: 11779216-11786975