WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38H4.7.2 Sequence Name  F38H4.7.2
Length (nt)  2011   Chromosome Location  IV: 11850923-11854975
Chromosome . Primary Identifier  IV Chromosome Location . Start  11850923
Chromosome Location . End  11854975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38H4.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006415 tag-30 F38H4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38H4.7 F38H4.7 1809   IV: 11851034-11851192

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F38H4.7.2 11850923 11854975 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145554   270   IV: 11850923-11851192 Caenorhabditis elegans
Exon145557   428   IV: 11851448-11851875 Caenorhabditis elegans
Exon145559   142   IV: 11851943-11852084 Caenorhabditis elegans
Exon145564   629   IV: 11853191-11853819 Caenorhabditis elegans
Exon145566   156   IV: 11853868-11854023 Caenorhabditis elegans
Exon145569   185   IV: 11854434-11854618 Caenorhabditis elegans
Exon145571   54   IV: 11854665-11854718 Caenorhabditis elegans
Exon145573   32   IV: 11854767-11854798 Caenorhabditis elegans
Exon145575   115   IV: 11854861-11854975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F38H4.7.2 11850923 11854975 -1

1 Sequence

Length
2011

1 Sequence Ontology Term

Identifier Name Description
transcript