WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F38H4.8c Sequence Name  F38H4.8c
Length (nt)  859   Chromosome Location  IV: 11855147-11856341
Chromosome . Primary Identifier  IV Chromosome Location . Start  11855147
Chromosome Location . End  11856341 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38H4.8c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001151 ech-2 F38H4.8 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38H4.8c 11855147 11856341 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145633   133   IV: 11855147-11855279 Caenorhabditis elegans
Exon145637   276   IV: 11855431-11855706 Caenorhabditis elegans
Exon145640   191   IV: 11855754-11855944 Caenorhabditis elegans
Exon145642   66   IV: 11855998-11856063 Caenorhabditis elegans
Exon145645   118   IV: 11856106-11856223 Caenorhabditis elegans
Exon145646   75   IV: 11856267-11856341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38H4.8c 11855147 11856341 -1

1 Sequence

Length
859

1 Sequence Ontology Term

Identifier Name Description
transcript