WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E6.4.1 Sequence Name  C29E6.4.1
Length (nt)  3637   Chromosome Location  IV: 11878549-11884134
Chromosome . Primary Identifier  IV Chromosome Location . Start  11878549
Chromosome Location . End  11884134 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007802 cutl-27 C29E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E6.4 C29E6.4 2910   IV: 11878549-11878624

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E6.4.1 11878549 11884134 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145639   76   IV: 11878549-11878624 Caenorhabditis elegans
Exon145642   128   IV: 11879167-11879294 Caenorhabditis elegans
Exon145643   138   IV: 11879345-11879482 Caenorhabditis elegans
Exon145644   233   IV: 11879530-11879762 Caenorhabditis elegans
Exon145645   89   IV: 11879825-11879913 Caenorhabditis elegans
Exon145646   152   IV: 11880081-11880232 Caenorhabditis elegans
Exon145647   193   IV: 11880347-11880539 Caenorhabditis elegans
Exon145648   322   IV: 11880595-11880916 Caenorhabditis elegans
Exon145649   374   IV: 11880978-11881351 Caenorhabditis elegans
Exon145650   230   IV: 11881453-11881682 Caenorhabditis elegans
Exon145651   129   IV: 11881730-11881858 Caenorhabditis elegans
Exon145652   146   IV: 11881901-11882046 Caenorhabditis elegans
Exon145653   376   IV: 11882237-11882612 Caenorhabditis elegans
Exon145654   133   IV: 11882661-11882793 Caenorhabditis elegans
Exon145655   133   IV: 11882841-11882973 Caenorhabditis elegans
Exon145657   785   IV: 11883350-11884134 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E6.4.1 11878549 11884134 1

1 Sequence

Length
3637

1 Sequence Ontology Term

Identifier Name Description
transcript