WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C29E6.1c Sequence Name  C29E6.1c
Length (nt)  2082   Chromosome Location  IV: 11885618-11885678
Chromosome . Primary Identifier  IV Chromosome Location . Start  11885618
Chromosome Location . End  11885678
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E6.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05332 LET-653, isoform c 76.8 693 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00070332
WBRNAi00041455
WBRNAi00024670
WBRNAi00008461
WBRNAi00064603
WBRNAi00064834
WBRNAi00030263
WBRNAi00068443
WBRNAi00068444
WBRNAi00068445
WBRNAi00068446
WBRNAi00068447
WBRNAi00064487
WBRNAi00068903
WBRNAi00070330
WBRNAi00070329
WBRNAi00070331
WBRNAi00114316

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C29E6.1c 11885618 11885678 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C29E6.1c 11885618 11885678 1
CDS:C29E6.1c 11885730 11886023 1
CDS:C29E6.1c 11886446 11886724 1
CDS:C29E6.1c 11886770 11886975 1
CDS:C29E6.1c 11888424 11888584 1
CDS:C29E6.1c 11888697 11888816 1
CDS:C29E6.1c 11889557 11889853 1
CDS:C29E6.1c 11890084 11890453 1
CDS:C29E6.1c 11890551 11890734 1
CDS:C29E6.1c 11890783 11890892 1

1 Sequence

Length
2082

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29E6.1c.1 C29E6.1c.1 2082   IV: 11885618-11890892