WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:VZK822L.1c.1 Sequence Name  VZK822L.1c.1
Length (nt)  690   Chromosome Location  IV: 11913819-11914671
Chromosome . Primary Identifier  IV Chromosome Location . Start  11913819
Chromosome Location . End  11914671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
VZK822L.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001398 fat-6 VZK822L.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:VZK822L.1c VZK822L.1c 690   IV: 11913819-11914098

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:VZK822L.1c.1 11913819 11914671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145711   280   IV: 11913819-11914098 Caenorhabditis elegans
Exon145715   162   IV: 11914207-11914368 Caenorhabditis elegans
Exon145716   248   IV: 11914424-11914671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:VZK822L.1c.1 11913819 11914671 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
transcript