WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK822.1.1 Sequence Name  ZK822.1.1
Length (nt)  2873   Chromosome Location  IV: 11918032-11922131
Chromosome . Primary Identifier  IV Chromosome Location . Start  11918032
Chromosome Location . End  11922131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK822.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014089 ZK822.1 ZK822.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK822.1 ZK822.1 2742   IV: 11918146-11918343

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK822.1.1 11918032 11922131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145726   312   IV: 11918032-11918343 Caenorhabditis elegans
Exon145728   677   IV: 11918489-11919165 Caenorhabditis elegans
Exon145729   148   IV: 11919212-11919359 Caenorhabditis elegans
Exon145730   138   IV: 11919431-11919568 Caenorhabditis elegans
Exon145731   602   IV: 11919722-11920323 Caenorhabditis elegans
Exon145732   327   IV: 11920374-11920700 Caenorhabditis elegans
Exon145734   489   IV: 11920999-11921487 Caenorhabditis elegans
Exon145735   113   IV: 11921533-11921645 Caenorhabditis elegans
Exon145736   67   IV: 11922065-11922131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK822.1.1 11918032 11922131 -1

1 Sequence

Length
2873

1 Sequence Ontology Term

Identifier Name Description
transcript