WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK829.2.1 Sequence Name  ZK829.2.1
Length (nt)  2811   Chromosome Location  IV: 11946066-11949817
Chromosome . Primary Identifier  IV Chromosome Location . Start  11946066
Chromosome Location . End  11949817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK829.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001839 hdl-1 ZK829.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK829.2 ZK829.2 2718   IV: 11946106-11946224

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.2.1 11946066 11949817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145801   159   IV: 11946066-11946224 Caenorhabditis elegans
Exon145802   177   IV: 11946273-11946449 Caenorhabditis elegans
Exon145803   121   IV: 11946498-11946618 Caenorhabditis elegans
Exon145804   322   IV: 11946670-11946991 Caenorhabditis elegans
Exon145805   380   IV: 11947033-11947412 Caenorhabditis elegans
Exon145806   135   IV: 11947460-11947594 Caenorhabditis elegans
Exon145807   572   IV: 11947641-11948212 Caenorhabditis elegans
Exon145808   70   IV: 11948348-11948417 Caenorhabditis elegans
Exon145809   74   IV: 11948461-11948534 Caenorhabditis elegans
Exon145810   64   IV: 11948585-11948648 Caenorhabditis elegans
Exon145811   59   IV: 11948695-11948753 Caenorhabditis elegans
Exon145812   343   IV: 11948801-11949143 Caenorhabditis elegans
Exon145813   84   IV: 11949394-11949477 Caenorhabditis elegans
Exon145814   141   IV: 11949523-11949663 Caenorhabditis elegans
Exon145815   110   IV: 11949708-11949817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.2.1 11946066 11949817 -1

1 Sequence

Length
2811

1 Sequence Ontology Term

Identifier Name Description
transcript