WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK829.2 Sequence Name  ZK829.2
Length (nt)  2718   Chromosome Location  IV: 11946106-11946224
Chromosome . Primary Identifier  IV Chromosome Location . Start  11946106
Chromosome Location . End  11946224
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK829.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40593 HDL-1 102.0 905 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00059748
WBRNAi00038455

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK829.2 11946106 11946224 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001839 hdl-1 ZK829.2 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK829.2 11946106 11946224 -1
CDS:ZK829.2 11946273 11946449 -1
CDS:ZK829.2 11946498 11946618 -1
CDS:ZK829.2 11946670 11946991 -1
CDS:ZK829.2 11947033 11947412 -1
CDS:ZK829.2 11947460 11947594 -1
CDS:ZK829.2 11947641 11948212 -1
CDS:ZK829.2 11948348 11948417 -1
CDS:ZK829.2 11948461 11948534 -1
CDS:ZK829.2 11948585 11948648 -1
CDS:ZK829.2 11948695 11948753 -1
CDS:ZK829.2 11948801 11949143 -1
CDS:ZK829.2 11949394 11949477 -1
CDS:ZK829.2 11949523 11949663 -1
CDS:ZK829.2 11949708 11949764 -1

1 Sequence

Length
2718

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK829.2.1 ZK829.2.1 2811   IV: 11946066-11949817