WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK829.4.2 Sequence Name  ZK829.4.2
Length (nt)  1756   Chromosome Location  IV: 11953249-11955521
Chromosome . Primary Identifier  IV Chromosome Location . Start  11953249
Chromosome Location . End  11955521 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK829.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014095 gdh-1 ZK829.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK829.4 ZK829.4 1611   IV: 11953252-11953527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.4.2 11953249 11955521 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145819   279   IV: 11953249-11953527 Caenorhabditis elegans
Exon145822   405   IV: 11953575-11953979 Caenorhabditis elegans
Exon145824   664   IV: 11954025-11954688 Caenorhabditis elegans
Exon145825   274   IV: 11954949-11955222 Caenorhabditis elegans
Exon145827   134   IV: 11955388-11955521 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.4.2 11953249 11955521 1

1 Sequence

Length
1756

1 Sequence Ontology Term

Identifier Name Description
transcript