WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK829.6.1 Sequence Name  ZK829.6.1
Length (nt)  1362   Chromosome Location  IV: 11957547-11959804
Chromosome . Primary Identifier  IV Chromosome Location . Start  11957547
Chromosome Location . End  11959804 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK829.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006566 tgt-1 ZK829.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK829.6 ZK829.6 1239   IV: 11957659-11957901

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.6.1 11957547 11959804 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145829   355   IV: 11957547-11957901 Caenorhabditis elegans
Exon145830   843   IV: 11958503-11959345 Caenorhabditis elegans
Exon145831   164   IV: 11959641-11959804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.6.1 11957547 11959804 -1

1 Sequence

Length
1362

1 Sequence Ontology Term

Identifier Name Description
transcript