WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK829.8.1 Sequence Name  ZK829.8.1
Length (nt)  1038   Chromosome Location  IV: 11963910-11965427
Chromosome . Primary Identifier  IV Chromosome Location . Start  11963910
Chromosome Location . End  11965427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK829.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005591 srj-1 ZK829.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK829.8 ZK829.8 1038   IV: 11963910-11964117

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.8.1 11963910 11965427 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145837   208   IV: 11963910-11964117 Caenorhabditis elegans
Exon145838   266   IV: 11964163-11964428 Caenorhabditis elegans
Exon145839   205   IV: 11964712-11964916 Caenorhabditis elegans
Exon145840   167   IV: 11965023-11965189 Caenorhabditis elegans
Exon145841   192   IV: 11965236-11965427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK829.8.1 11963910 11965427 -1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
transcript