WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1a.1 Sequence Name  ZK617.1a.1
Length (nt)  21601   Chromosome Location  IV: 11972697-12011007
Chromosome . Primary Identifier  IV Chromosome Location . Start  11972697
Chromosome Location . End  12011007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1a ZK617.1a 20520   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1a.1 11972697 12011007 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145860   1050   IV: 11972697-11973746 Caenorhabditis elegans
Exon145869   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145878   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145887   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145896   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145905   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145914   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145923   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145932   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145941   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon145950   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon145959   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon145968   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon145978   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon145989   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon145998   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146007   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146016   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146030   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146049   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146057   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146077   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146083   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146091   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146099   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146105   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146111   263   IV: 12007736-12007998 Caenorhabditis elegans
Exon146117   100   IV: 12008052-12008151 Caenorhabditis elegans
Exon146123   221   IV: 12008199-12008419 Caenorhabditis elegans
Exon146129   153   IV: 12009206-12009358 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1a.1 11972697 12011007 -1

1 Sequence

Length
21601

1 Sequence Ontology Term

Identifier Name Description
transcript