WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1d.1 Sequence Name  ZK617.1d.1
Length (nt)  19359   Chromosome Location  IV: 11973651-12003102
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  12003102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1d ZK617.1d 19359   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1d.1 11973651 12003102 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145884   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145893   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145902   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145911   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145920   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145929   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145938   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145947   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145956   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145965   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon145974   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon145983   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon145992   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146002   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146013   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146022   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146031   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146040   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146054   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146073   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146081   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146096   489   IV: 12002614-12003102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1d.1 11973651 12003102 -1

1 Sequence

Length
19359

1 Sequence Ontology Term

Identifier Name Description
transcript