WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1a.1 Sequence Name  ZK617.1a.1
Length (nt)  21601   Chromosome Location  IV: 11972697-12011007
Chromosome . Primary Identifier  IV Chromosome Location . Start  11972697
Chromosome Location . End  12011007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1a ZK617.1a 20520   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1a.1 11972697 12011007 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145915   1050   IV: 11972697-11973746 Caenorhabditis elegans
Exon145924   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145933   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145942   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145951   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145960   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145969   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145978   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145987   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145996   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon146005   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon146014   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon146023   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146033   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146044   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146053   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146062   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146071   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146085   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146104   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146112   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146132   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146138   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146146   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146154   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146160   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146166   263   IV: 12007736-12007998 Caenorhabditis elegans
Exon146172   100   IV: 12008052-12008151 Caenorhabditis elegans
Exon146178   221   IV: 12008199-12008419 Caenorhabditis elegans
Exon146184   153   IV: 12009206-12009358 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1a.1 11972697 12011007 -1

1 Sequence

Length
21601

1 Sequence Ontology Term

Identifier Name Description
transcript