WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1c.1 Sequence Name  ZK617.1c.1
Length (nt)  20121   Chromosome Location  IV: 11973651-11999670
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  11999670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1c ZK617.1c 19860   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1c.1 11973651 11999670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145917   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145926   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145935   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145944   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145953   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145962   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145971   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145980   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145989   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145998   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon146007   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon146016   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon146025   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146035   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146046   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146055   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146064   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146073   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146081   339   IV: 11994770-11995108 Caenorhabditis elegans
Exon146087   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146093   528   IV: 11995721-11996248 Caenorhabditis elegans
Exon146099   90   IV: 11996307-11996396 Caenorhabditis elegans
Exon146106   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146114   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146122   294   IV: 11999377-11999670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1c.1 11973651 11999670 -1

1 Sequence

Length
20121

1 Sequence Ontology Term

Identifier Name Description
transcript