WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1g.1 Sequence Name  ZK617.1g.1
Length (nt)  20547   Chromosome Location  IV: 11973651-12010880
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  12010880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1g ZK617.1g 20547   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1g.1 11973651 12010880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145887   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145896   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145905   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145914   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145923   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145932   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145941   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145950   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145959   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145968   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon145977   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon145986   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon145995   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146005   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146008   27   IV: 11993340-11993366 Caenorhabditis elegans
Exon146016   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146025   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146034   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146043   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146056   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146075   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146083   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146101   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146107   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146115   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146123   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146129   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146135   263   IV: 12007736-12007998 Caenorhabditis elegans
Exon146141   100   IV: 12008052-12008151 Caenorhabditis elegans
Exon146147   221   IV: 12008199-12008419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1g.1 11973651 12010880 -1

1 Sequence

Length
20547

1 Sequence Ontology Term

Identifier Name Description
transcript