WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1h.1 Sequence Name  ZK617.1h.1
Length (nt)  21429   Chromosome Location  IV: 11973651-12010880
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  12010880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1h ZK617.1h 21429   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1h.1 11973651 12010880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

34 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145888   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145897   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145906   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145915   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145924   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145933   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145942   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145951   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145960   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon145969   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon145978   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon145987   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon145996   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146006   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146009   27   IV: 11993340-11993366 Caenorhabditis elegans
Exon146017   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146026   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146035   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146044   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146049   339   IV: 11994770-11995108 Caenorhabditis elegans
Exon146061   528   IV: 11995721-11996248 Caenorhabditis elegans
Exon146066   90   IV: 11996307-11996396 Caenorhabditis elegans
Exon146076   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146084   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146102   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146108   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146116   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146124   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146130   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146136   263   IV: 12007736-12007998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1h.1 11973651 12010880 -1

1 Sequence

Length
21429

1 Sequence Ontology Term

Identifier Name Description
transcript