WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1f.1 Sequence Name  ZK617.1f.1
Length (nt)  20784   Chromosome Location  IV: 11973651-12010880
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  12010880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1f ZK617.1f 20784   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1f.1 11973651 12010880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145920   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145929   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145938   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145947   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145956   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145965   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145974   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145983   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145992   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon146001   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon146010   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon146019   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon146028   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146038   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146049   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146058   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146067   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146076   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146082   339   IV: 11994770-11995108 Caenorhabditis elegans
Exon146108   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146116   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146134   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146140   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146148   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146156   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146162   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146168   263   IV: 12007736-12007998 Caenorhabditis elegans
Exon146174   100   IV: 12008052-12008151 Caenorhabditis elegans
Exon146180   221   IV: 12008199-12008419 Caenorhabditis elegans
Exon146186   153   IV: 12009206-12009358 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK617.1f.1 11973651 12010880 -1

1 Sequence

Length
20784

1 Sequence Ontology Term

Identifier Name Description
transcript