WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK617.1g.1 Sequence Name  ZK617.1g.1
Length (nt)  20547   Chromosome Location  IV: 11973651-12010880
Chromosome . Primary Identifier  IV Chromosome Location . Start  11973651
Chromosome Location . End  12010880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK617.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006759 unc-22 ZK617.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK617.1g ZK617.1g 20547   IV: 11973651-11973746

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1g.1 11973651 12010880 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon145921   96   IV: 11973651-11973746 Caenorhabditis elegans
Exon145930   98   IV: 11974056-11974153 Caenorhabditis elegans
Exon145939   253   IV: 11974201-11974453 Caenorhabditis elegans
Exon145948   1617   IV: 11974513-11976129 Caenorhabditis elegans
Exon145957   9614   IV: 11976183-11985796 Caenorhabditis elegans
Exon145966   382   IV: 11985843-11986224 Caenorhabditis elegans
Exon145975   224   IV: 11986277-11986500 Caenorhabditis elegans
Exon145984   285   IV: 11986550-11986834 Caenorhabditis elegans
Exon145993   161   IV: 11986885-11987045 Caenorhabditis elegans
Exon146002   1445   IV: 11987093-11988537 Caenorhabditis elegans
Exon146011   1037   IV: 11988585-11989621 Caenorhabditis elegans
Exon146020   2619   IV: 11989671-11992289 Caenorhabditis elegans
Exon146029   223   IV: 11992344-11992566 Caenorhabditis elegans
Exon146039   166   IV: 11992930-11993095 Caenorhabditis elegans
Exon146042   27   IV: 11993340-11993366 Caenorhabditis elegans
Exon146050   116   IV: 11993473-11993588 Caenorhabditis elegans
Exon146059   161   IV: 11993881-11994041 Caenorhabditis elegans
Exon146068   85   IV: 11994094-11994178 Caenorhabditis elegans
Exon146077   54   IV: 11994227-11994280 Caenorhabditis elegans
Exon146090   75   IV: 11995254-11995328 Caenorhabditis elegans
Exon146109   63   IV: 11996801-11996863 Caenorhabditis elegans
Exon146117   96   IV: 11997773-11997868 Caenorhabditis elegans
Exon146135   102   IV: 12005262-12005363 Caenorhabditis elegans
Exon146141   137   IV: 12005443-12005579 Caenorhabditis elegans
Exon146149   173   IV: 12005764-12005936 Caenorhabditis elegans
Exon146157   77   IV: 12006615-12006691 Caenorhabditis elegans
Exon146163   370   IV: 12006921-12007290 Caenorhabditis elegans
Exon146169   263   IV: 12007736-12007998 Caenorhabditis elegans
Exon146175   100   IV: 12008052-12008151 Caenorhabditis elegans
Exon146181   221   IV: 12008199-12008419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK617.1g.1 11973651 12010880 -1

1 Sequence

Length
20547

1 Sequence Ontology Term

Identifier Name Description
transcript