WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12G3.2c.3 Sequence Name  T12G3.2c.3
Length (nt)  3130   Chromosome Location  IV: 12038983-12043737
Chromosome . Primary Identifier  IV Chromosome Location . Start  12038983
Chromosome Location . End  12043737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12G3.2c.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011738 T12G3.2 T12G3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12G3.2c T12G3.2c 2712   IV: 12039225-12039332

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.2c.3 12038983 12043737 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146230   350   IV: 12038983-12039332 Caenorhabditis elegans
Exon146256   256   IV: 12039510-12039765 Caenorhabditis elegans
Exon146270   385   IV: 12040147-12040531 Caenorhabditis elegans
Exon146284   246   IV: 12040638-12040883 Caenorhabditis elegans
Exon146298   818   IV: 12041142-12041959 Caenorhabditis elegans
Exon146314   782   IV: 12042028-12042809 Caenorhabditis elegans
Exon146324   171   IV: 12043338-12043508 Caenorhabditis elegans
Exon146332   122   IV: 12043616-12043737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.2c.3 12038983 12043737 -1

1 Sequence

Length
3130

1 Sequence Ontology Term

Identifier Name Description
transcript