WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12G3.8b.1 Sequence Name  T12G3.8b.1
Length (nt)  696   Chromosome Location  IV: 12049932-12050724
Chromosome . Primary Identifier  IV Chromosome Location . Start  12049932
Chromosome Location . End  12050724 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12G3.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12G3.8b T12G3.8b 696   IV: 12049932-12050240

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.8b.1 12049932 12050724 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146288   309   IV: 12049932-12050240 Caenorhabditis elegans
Exon146290   198   IV: 12050294-12050491 Caenorhabditis elegans
Exon146292   189   IV: 12050536-12050724 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12G3.8b.1 12049932 12050724 -1

1 Sequence

Length
696

1 Sequence Ontology Term

Identifier Name Description
transcript