WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A10.8.1 Sequence Name  F11A10.8.1
Length (nt)  1029   Chromosome Location  IV: 12092322-12093445
Chromosome . Primary Identifier  IV Chromosome Location . Start  12092322
Chromosome Location . End  12093445 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044329 cpsf-4 F11A10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A10.8 F11A10.8 909   IV: 12092412-12092558

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A10.8.1 12092322 12093445 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146390   237   IV: 12092322-12092558 Caenorhabditis elegans
Exon146391   639   IV: 12092605-12093243 Caenorhabditis elegans
Exon146392   153   IV: 12093293-12093445 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A10.8.1 12092322 12093445 -1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
transcript