WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M18.7a Sequence Name  M18.7a
Length (nt)  723   Chromosome Location  IV: 12123314-12123521
Chromosome . Primary Identifier  IV Chromosome Location . Start  12123314
Chromosome Location . End  12123521
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M18.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06198 ALY-3, isoform a 25.7 240 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00063792
WBRNAi00051008
WBRNAi00066431
WBRNAi00066433
WBRNAi00066432
WBRNAi00066434
WBRNAi00008143
WBRNAi00017240
WBRNAi00066426
WBRNAi00066429
WBRNAi00066428
WBRNAi00085030
WBRNAi00066430
WBRNAi00069869

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M18.7a 12123314 12123521 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000122 aly-3 M18.7 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:M18.7a 12123314 12123521 1
CDS:M18.7a 12123572 12123691 1
CDS:M18.7a 12123739 12123830 1
CDS:M18.7a 12124247 12124373 1
CDS:M18.7a 12124424 12124599 1

1 Sequence

Length
723

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M18.7a.1 M18.7a.1 965   IV: 12123282-12124809