WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.1c.1 Sequence Name  B0001.1c.1
Length (nt)  213   Chromosome Location  IV: 12134654-12134919
Chromosome . Primary Identifier  IV Chromosome Location . Start  12134654
Chromosome Location . End  12134919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003010 lin-24 B0001.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.1c B0001.1c 213   IV: 12134654-12134722

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0001.1c.1 12134654 12134919 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146497   69   IV: 12134654-12134722 Caenorhabditis elegans
Exon146499   144   IV: 12134776-12134919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0001.1c.1 12134654 12134919 1

1 Sequence

Length
213

1 Sequence Ontology Term

Identifier Name Description
transcript