WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.8d.3 Sequence Name  B0001.8d.3
Length (nt)  2028   Chromosome Location  IV: 12138850-12141059
Chromosome . Primary Identifier  IV Chromosome Location . Start  12138850
Chromosome Location . End  12141059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.8d.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007093 B0001.8 B0001.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.8d B0001.8d 930   IV: 12139981-12140472

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0001.8d.3 12138850 12141059 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146521   465   IV: 12138850-12139314 Caenorhabditis elegans
Exon146535   1113   IV: 12139360-12140472 Caenorhabditis elegans
Exon146549   198   IV: 12140521-12140718 Caenorhabditis elegans
Exon146555   127   IV: 12140765-12140891 Caenorhabditis elegans
Exon146561   125   IV: 12140935-12141059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0001.8d.3 12138850 12141059 -1

1 Sequence

Length
2028

1 Sequence Ontology Term

Identifier Name Description
transcript