WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.6.2 Sequence Name  B0001.6.2
Length (nt)  2352   Chromosome Location  IV: 12156838-12164281
Chromosome . Primary Identifier  IV Chromosome Location . Start  12156838
Chromosome Location . End  12164281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007091 eri-12 B0001.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.6 B0001.6 2025   IV: 12159480-12159551

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0001.6.2 12156838 12164281 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146638   143   IV: 12156838-12156980 Caenorhabditis elegans
Exon146640   82   IV: 12159470-12159551 Caenorhabditis elegans
Exon146643   62   IV: 12159599-12159660 Caenorhabditis elegans
Exon146645   169   IV: 12159706-12159874 Caenorhabditis elegans
Exon146647   126   IV: 12159931-12160056 Caenorhabditis elegans
Exon146649   107   IV: 12160548-12160654 Caenorhabditis elegans
Exon146651   130   IV: 12160703-12160832 Caenorhabditis elegans
Exon146653   82   IV: 12161555-12161636 Caenorhabditis elegans
Exon146655   304   IV: 12161687-12161990 Caenorhabditis elegans
Exon146657   177   IV: 12162067-12162243 Caenorhabditis elegans
Exon146659   126   IV: 12162294-12162419 Caenorhabditis elegans
Exon146661   60   IV: 12162814-12162873 Caenorhabditis elegans
Exon146663   132   IV: 12162922-12163053 Caenorhabditis elegans
Exon146665   370   IV: 12163582-12163951 Caenorhabditis elegans
Exon146667   282   IV: 12164000-12164281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0001.6.2 12156838 12164281 1

1 Sequence

Length
2352

1 Sequence Ontology Term

Identifier Name Description
transcript