WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.6.1 Sequence Name  B0001.6.1
Length (nt)  2197   Chromosome Location  IV: 12159470-12164269
Chromosome . Primary Identifier  IV Chromosome Location . Start  12159470
Chromosome Location . End  12164269 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007091 eri-12 B0001.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.6 B0001.6 2025   IV: 12159480-12159551

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0001.6.1 12159470 12164269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146662   82   IV: 12159470-12159551 Caenorhabditis elegans
Exon146663   62   IV: 12159599-12159660 Caenorhabditis elegans
Exon146665   169   IV: 12159706-12159874 Caenorhabditis elegans
Exon146667   126   IV: 12159931-12160056 Caenorhabditis elegans
Exon146669   107   IV: 12160548-12160654 Caenorhabditis elegans
Exon146671   130   IV: 12160703-12160832 Caenorhabditis elegans
Exon146673   82   IV: 12161555-12161636 Caenorhabditis elegans
Exon146675   304   IV: 12161687-12161990 Caenorhabditis elegans
Exon146677   177   IV: 12162067-12162243 Caenorhabditis elegans
Exon146679   126   IV: 12162294-12162419 Caenorhabditis elegans
Exon146681   60   IV: 12162814-12162873 Caenorhabditis elegans
Exon146683   132   IV: 12162922-12163053 Caenorhabditis elegans
Exon146685   370   IV: 12163582-12163951 Caenorhabditis elegans
Exon146687   270   IV: 12164000-12164269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0001.6.1 12159470 12164269 1

1 Sequence

Length
2197

1 Sequence Ontology Term

Identifier Name Description
transcript