WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0001.7a.1 Sequence Name  B0001.7a.1
Length (nt)  2381   Chromosome Location  IV: 12151192-12154245
Chromosome . Primary Identifier  IV Chromosome Location . Start  12151192
Chromosome Location . End  12154245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007092 B0001.7 B0001.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0001.7a B0001.7a 2196   IV: 12151374-12151456

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0001.7a.1 12151192 12154245 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146664   265   IV: 12151192-12151456 Caenorhabditis elegans
Exon146666   139   IV: 12151509-12151647 Caenorhabditis elegans
Exon146669   66   IV: 12151703-12151768 Caenorhabditis elegans
Exon146673   111   IV: 12151815-12151925 Caenorhabditis elegans
Exon146675   167   IV: 12151972-12152138 Caenorhabditis elegans
Exon146677   82   IV: 12152188-12152269 Caenorhabditis elegans
Exon146679   194   IV: 12152322-12152515 Caenorhabditis elegans
Exon146681   298   IV: 12152648-12152945 Caenorhabditis elegans
Exon146683   336   IV: 12152995-12153330 Caenorhabditis elegans
Exon146685   255   IV: 12153390-12153644 Caenorhabditis elegans
Exon146687   66   IV: 12153691-12153756 Caenorhabditis elegans
Exon146689   159   IV: 12153801-12153959 Caenorhabditis elegans
Exon146691   243   IV: 12154003-12154245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0001.7a.1 12151192 12154245 -1

1 Sequence

Length
2381

1 Sequence Ontology Term

Identifier Name Description
transcript