WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0001.6 Sequence Name  B0001.6
Length (nt)  2025   Chromosome Location  IV: 12159480-12159551
Chromosome . Primary Identifier  IV Chromosome Location . Start  12159480
Chromosome Location . End  12159551
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0001.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31863 ERI-12 77.5 674 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00038636
WBRNAi00027938

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0001.6 12159480 12159551 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007091 eri-12 B0001.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0001.6 12159480 12159551 1
CDS:B0001.6 12159599 12159660 1
CDS:B0001.6 12159706 12159874 1
CDS:B0001.6 12159931 12160056 1
CDS:B0001.6 12160548 12160654 1
CDS:B0001.6 12160703 12160832 1
CDS:B0001.6 12161555 12161636 1
CDS:B0001.6 12161687 12161990 1
CDS:B0001.6 12162067 12162243 1
CDS:B0001.6 12162294 12162419 1
CDS:B0001.6 12162814 12162873 1
CDS:B0001.6 12162922 12163053 1
CDS:B0001.6 12163582 12163951 1
CDS:B0001.6 12164000 12164107 1

1 Sequence

Length
2025

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0001.6.2 B0001.6.2 2352   IV: 12156838-12164281
Transcript:B0001.6.1 B0001.6.1 2197   IV: 12159470-12164269