WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39C12A.3b Sequence Name  Y39C12A.3b
Length (nt)  948   Chromosome Location  IV: 12227912-12228010
Chromosome . Primary Identifier  IV Chromosome Location . Start  12227912
Chromosome Location . End  12228010
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39C12A.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21704 SRE-18, isoform b 37.3 315 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00056218

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39C12A.3b 12227912 12228010 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012705 sre-18 Y39C12A.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39C12A.3b 12227912 12228010 -1
CDS:Y39C12A.3b 12228057 12228135 -1
CDS:Y39C12A.3b 12228185 12228318 -1
CDS:Y39C12A.3b 12228771 12228946 -1
CDS:Y39C12A.3b 12228991 12229143 -1
CDS:Y39C12A.3b 12229197 12229253 -1
CDS:Y39C12A.3b 12229481 12229638 -1
CDS:Y39C12A.3b 12229688 12229779 -1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39C12A.3b.1 Y39C12A.3b.1 1143   IV: 12227717-12229779