WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39C12A.8.1 Sequence Name  Y39C12A.8.1
Length (nt)  1284   Chromosome Location  IV: 12251093-12252679
Chromosome . Primary Identifier  IV Chromosome Location . Start  12251093
Chromosome Location . End  12252679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39C12A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001044 dnj-26 Y39C12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39C12A.8 Y39C12A.8 1098   IV: 12251248-12251521

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39C12A.8.1 12251093 12252679 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146835   429   IV: 12251093-12251521 Caenorhabditis elegans
Exon146836   160   IV: 12251575-12251734 Caenorhabditis elegans
Exon146837   456   IV: 12251857-12252312 Caenorhabditis elegans
Exon146838   239   IV: 12252441-12252679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39C12A.8.1 12251093 12252679 -1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
transcript