WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39C12A.9.1 Sequence Name  Y39C12A.9.1
Length (nt)  913   Chromosome Location  IV: 12257525-12259211
Chromosome . Primary Identifier  IV Chromosome Location . Start  12257525
Chromosome Location . End  12259211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39C12A.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012710 Y39C12A.9 Y39C12A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39C12A.9 Y39C12A.9 696   IV: 12257723-12258036

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39C12A.9.1 12257525 12259211 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146839   512   IV: 12257525-12258036 Caenorhabditis elegans
Exon146840   240   IV: 12258496-12258735 Caenorhabditis elegans
Exon146841   161   IV: 12259051-12259211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39C12A.9.1 12257525 12259211 -1

1 Sequence

Length
913

1 Sequence Ontology Term

Identifier Name Description
transcript