WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C42C1.13b Sequence Name  C42C1.13b
Length (nt)  621   Chromosome Location  IV: 12278775-12278846
Chromosome . Primary Identifier  IV Chromosome Location . Start  12278775
Chromosome Location . End  12278846
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.13b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41367 VKMT-1, isoform b 23.2 206 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00042334

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C42C1.13b 12278775 12278846 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016591 vkmt-1 C42C1.13 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C42C1.13b 12278775 12278846 1
CDS:C42C1.13b 12278908 12279003 1
CDS:C42C1.13b 12279047 12279499 1

1 Sequence

Length
621

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C42C1.13b.1 C42C1.13b.1 717   IV: 12278725-12279545