WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E10.2a.1 Sequence Name  K09E10.2a.1
Length (nt)  2104   Chromosome Location  IV: 12308293-12311622
Chromosome . Primary Identifier  IV Chromosome Location . Start  12308293
Chromosome Location . End  12311622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019580 oac-58 K09E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E10.2a K09E10.2a 2088   IV: 12308293-12308538

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09E10.2a.1 12308293 12311622 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147000   246   IV: 12308293-12308538 Caenorhabditis elegans
Exon147001   214   IV: 12308629-12308842 Caenorhabditis elegans
Exon147002   112   IV: 12308886-12308997 Caenorhabditis elegans
Exon147004   121   IV: 12309261-12309381 Caenorhabditis elegans
Exon147005   110   IV: 12309655-12309764 Caenorhabditis elegans
Exon147006   179   IV: 12309808-12309986 Caenorhabditis elegans
Exon147007   64   IV: 12310028-12310091 Caenorhabditis elegans
Exon147008   167   IV: 12310139-12310305 Caenorhabditis elegans
Exon147010   346   IV: 12310607-12310952 Caenorhabditis elegans
Exon147011   404   IV: 12311037-12311440 Caenorhabditis elegans
Exon147013   141   IV: 12311482-12311622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09E10.2a.1 12308293 12311622 -1

1 Sequence

Length
2104

1 Sequence Ontology Term

Identifier Name Description
transcript