WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19B6.1d.1 Sequence Name  F19B6.1d.1
Length (nt)  1710   Chromosome Location  IV: 12331581-12336041
Chromosome . Primary Identifier  IV Chromosome Location . Start  12331581
Chromosome Location . End  12336041 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19B6.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008948 F19B6.1 F19B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19B6.1d F19B6.1d 1710   IV: 12331581-12331715

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19B6.1d.1 12331581 12336041 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147094   135   IV: 12331581-12331715 Caenorhabditis elegans
Exon147100   349   IV: 12331758-12332106 Caenorhabditis elegans
Exon147105   383   IV: 12332657-12333039 Caenorhabditis elegans
Exon147110   198   IV: 12333089-12333286 Caenorhabditis elegans
Exon147115   354   IV: 12333552-12333905 Caenorhabditis elegans
Exon147119   146   IV: 12333956-12334101 Caenorhabditis elegans
Exon147124   104   IV: 12334497-12334600 Caenorhabditis elegans
Exon147125   41   IV: 12336001-12336041 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19B6.1d.1 12331581 12336041 -1

1 Sequence

Length
1710

1 Sequence Ontology Term

Identifier Name Description
transcript