WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC518.2.1 Sequence Name  ZC518.2.1
Length (nt)  3663   Chromosome Location  IV: 12355600-12360792
Chromosome . Primary Identifier  IV Chromosome Location . Start  12355600
Chromosome Location . End  12360792 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004756 sec-24.2 ZC518.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.2 ZC518.2 2955   IV: 12356285-12356402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC518.2.1 12355600 12360792 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147160   803   IV: 12355600-12356402 Caenorhabditis elegans
Exon147161   104   IV: 12356902-12357005 Caenorhabditis elegans
Exon147162   309   IV: 12357050-12357358 Caenorhabditis elegans
Exon147163   617   IV: 12357409-12358025 Caenorhabditis elegans
Exon147164   610   IV: 12358393-12359002 Caenorhabditis elegans
Exon147165   110   IV: 12359055-12359164 Caenorhabditis elegans
Exon147166   230   IV: 12359223-12359452 Caenorhabditis elegans
Exon147167   161   IV: 12359758-12359918 Caenorhabditis elegans
Exon147168   312   IV: 12359963-12360274 Caenorhabditis elegans
Exon147169   189   IV: 12360322-12360510 Caenorhabditis elegans
Exon147170   218   IV: 12360575-12360792 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC518.2.1 12355600 12360792 -1

1 Sequence

Length
3663

1 Sequence Ontology Term

Identifier Name Description
transcript