WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC518.3c.2 Sequence Name  ZC518.3c.2
Length (nt)  3028   Chromosome Location  IV: 12363033-12371847
Chromosome . Primary Identifier  IV Chromosome Location . Start  12363033
Chromosome Location . End  12371847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.3c ZC518.3c 1794   IV: 12363046-12363238

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC518.3c.2 12363033 12371847 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147178   206   IV: 12363033-12363238 Caenorhabditis elegans
Exon147186   104   IV: 12363287-12363390 Caenorhabditis elegans
Exon147190   259   IV: 12363877-12364135 Caenorhabditis elegans
Exon147196   69   IV: 12368395-12368463 Caenorhabditis elegans
Exon147202   465   IV: 12368784-12369248 Caenorhabditis elegans
Exon147208   528   IV: 12369298-12369825 Caenorhabditis elegans
Exon147212   1397   IV: 12370451-12371847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC518.3c.2 12363033 12371847 1

1 Sequence

Length
3028

1 Sequence Ontology Term

Identifier Name Description
transcript