WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC518.3c Sequence Name  ZC518.3c
Length (nt)  1794   Chromosome Location  IV: 12363046-12363238
Chromosome . Primary Identifier  IV Chromosome Location . Start  12363046
Chromosome Location . End  12363238
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31745 CCR-4, isoform c 67.6 597 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00070528
WBRNAi00059000
WBRNAi00066736
WBRNAi00021747
WBRNAi00027018
WBRNAi00027019
WBRNAi00094026
WBRNAi00113547
WBRNAi00027553
WBRNAi00064351
WBRNAi00088605
WBRNAi00088712
WBRNAi00070526
WBRNAi00070525
WBRNAi00070527
WBRNAi00066549
WBRNAi00117560
WBRNAi00117559

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC518.3c 12363046 12363238 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC518.3c 12363046 12363238 1
CDS:ZC518.3c 12363287 12363390 1
CDS:ZC518.3c 12363877 12364135 1
CDS:ZC518.3c 12368395 12368463 1
CDS:ZC518.3c 12368784 12369248 1
CDS:ZC518.3c 12369298 12369825 1
CDS:ZC518.3c 12370451 12370626 1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC518.3c.1 ZC518.3c.1 3153   IV: 12362415-12371852
Transcript:ZC518.3c.2 ZC518.3c.2 3028   IV: 12363033-12371847